Serveur d'exploration SRAS

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

New coronavirus outbreak. Lessons learned from the severe acute respiratory syndrome epidemic

Identifieur interne : 001274 ( Main/Exploration ); précédent : 001273; suivant : 001275

New coronavirus outbreak. Lessons learned from the severe acute respiratory syndrome epidemic

Auteurs : E. Álvarez [Espagne] ; J. Donado-Campos [Espagne] ; F. Morilla [Espagne]

Source :

RBID : PMC:7108648

Abstract

SUMMARY

System dynamics approach offers great potential for addressing how intervention policies can affect the spread of emerging infectious diseases in complex and highly networked systems. Here, we develop a model that explains the severe acute respiratory syndrome coronavirus (SARS-CoV) epidemic that occurred in Hong Kong in 2003. The dynamic model developed with system dynamics methodology included 23 variables (five states, four flows, eight auxiliary variables, six parameters), five differential equations and 12 algebraic equations. The parameters were optimized following an iterative process of simulation to fit the real data from the epidemics. Univariate and multivariate sensitivity analyses were performed to determine the reliability of the model. In addition, we discuss how further testing using this model can inform community interventions to reduce the risk in current and future outbreaks, such as the recently Middle East respiratory syndrome coronavirus (MERS-CoV) epidemic.


Url:
DOI: 10.1017/S095026881400377X
PubMed: 25591619
PubMed Central: 7108648


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">New coronavirus outbreak. Lessons learned from the severe acute respiratory syndrome epidemic</title>
<author>
<name sortKey="Alvarez, E" sort="Alvarez, E" uniqKey="Alvarez E" first="E." last="Álvarez">E. Álvarez</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">
<addr-line>Centro de Biología Molecular Severo Ochoa</addr-line>
,
<addr-line>Consejo Superior de Investigaciones Científicas</addr-line>
,
<institution>Universidad Autónoma de Madrid (CSIC-UAM)</institution>
,
<addr-line>Madrid</addr-line>
,
<country>Spain</country>
</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Donado Campos, J" sort="Donado Campos, J" uniqKey="Donado Campos J" first="J." last="Donado-Campos">J. Donado-Campos</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">
<addr-line>Department of Preventive Medicine and Public Health</addr-line>
,
<addr-line>School of Medicine</addr-line>
,
<institution>Universidad Autónoma de Madrid/IdiPAZ</institution>
,
<addr-line>Madrid</addr-line>
,
<country>Spain</country>
</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Morilla, F" sort="Morilla, F" uniqKey="Morilla F" first="F." last="Morilla">F. Morilla</name>
<affiliation wicri:level="1">
<nlm:aff id="aff3">
<addr-line>Departamento de Informática y Automática,ETSI Informática</addr-line>
,
<institution>Universidad Nacional de Educación a Distancia UNED</institution>
,
<addr-line>Madrid</addr-line>
,
<country>Spain</country>
</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">25591619</idno>
<idno type="pmc">7108648</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7108648</idno>
<idno type="RBID">PMC:7108648</idno>
<idno type="doi">10.1017/S095026881400377X</idno>
<date when="2015">2015</date>
<idno type="wicri:Area/Pmc/Corpus">000F88</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000F88</idno>
<idno type="wicri:Area/Pmc/Curation">000F88</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000F88</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000782</idno>
<idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000782</idno>
<idno type="wicri:Area/Ncbi/Merge">002A12</idno>
<idno type="wicri:Area/Ncbi/Curation">002A12</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">002A12</idno>
<idno type="wicri:doubleKey">0950-2688:2015:Alvarez E:new:coronavirus:outbreak</idno>
<idno type="wicri:Area/Main/Merge">001276</idno>
<idno type="wicri:Area/Main/Curation">001274</idno>
<idno type="wicri:Area/Main/Exploration">001274</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">New coronavirus outbreak. Lessons learned from the severe acute respiratory syndrome epidemic</title>
<author>
<name sortKey="Alvarez, E" sort="Alvarez, E" uniqKey="Alvarez E" first="E." last="Álvarez">E. Álvarez</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">
<addr-line>Centro de Biología Molecular Severo Ochoa</addr-line>
,
<addr-line>Consejo Superior de Investigaciones Científicas</addr-line>
,
<institution>Universidad Autónoma de Madrid (CSIC-UAM)</institution>
,
<addr-line>Madrid</addr-line>
,
<country>Spain</country>
</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Donado Campos, J" sort="Donado Campos, J" uniqKey="Donado Campos J" first="J." last="Donado-Campos">J. Donado-Campos</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">
<addr-line>Department of Preventive Medicine and Public Health</addr-line>
,
<addr-line>School of Medicine</addr-line>
,
<institution>Universidad Autónoma de Madrid/IdiPAZ</institution>
,
<addr-line>Madrid</addr-line>
,
<country>Spain</country>
</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Morilla, F" sort="Morilla, F" uniqKey="Morilla F" first="F." last="Morilla">F. Morilla</name>
<affiliation wicri:level="1">
<nlm:aff id="aff3">
<addr-line>Departamento de Informática y Automática,ETSI Informática</addr-line>
,
<institution>Universidad Nacional de Educación a Distancia UNED</institution>
,
<addr-line>Madrid</addr-line>
,
<country>Spain</country>
</nlm:aff>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Epidemiology and Infection</title>
<idno type="ISSN">0950-2688</idno>
<idno type="eISSN">1469-4409</idno>
<imprint>
<date when="2015">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<title>SUMMARY</title>
<p>System dynamics approach offers great potential for addressing how intervention policies can affect the spread of emerging infectious diseases in complex and highly networked systems. Here, we develop a model that explains the severe acute respiratory syndrome coronavirus (SARS-CoV) epidemic that occurred in Hong Kong in 2003. The dynamic model developed with system dynamics methodology included 23 variables (five states, four flows, eight auxiliary variables, six parameters), five differential equations and 12 algebraic equations. The parameters were optimized following an iterative process of simulation to fit the real data from the epidemics. Univariate and multivariate sensitivity analyses were performed to determine the reliability of the model. In addition, we discuss how further testing using this model can inform community interventions to reduce the risk in current and future outbreaks, such as the recently Middle East respiratory syndrome coronavirus (MERS-CoV) epidemic.</p>
</div>
</front>
<back>
<div1 type="bibliography">
<listBibl>
<biblStruct>
<analytic>
<author>
<name sortKey="De Groot, Rj" uniqKey="De Groot R">RJ de Groot</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Zaki, Am" uniqKey="Zaki A">AM Zaki</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Assiri, A" uniqKey="Assiri A">A Assiri</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Mailles, A" uniqKey="Mailles A">A Mailles</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Drosten, C" uniqKey="Drosten C">C Drosten</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Marra, Ma" uniqKey="Marra M">MA Marra</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Peiris, Js" uniqKey="Peiris J">JS Peiris</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Annan, A" uniqKey="Annan A">A Annan</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Cotten, M" uniqKey="Cotten M">M Cotten</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Li, W" uniqKey="Li W">W Li</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Riley, S" uniqKey="Riley S">S Riley</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Chau, Ph" uniqKey="Chau P">PH Chau</name>
</author>
<author>
<name sortKey="Yip, Ps" uniqKey="Yip P">PS Yip</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Sterman, J" uniqKey="Sterman J">J Sterman</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Homer, Jb" uniqKey="Homer J">JB Homer</name>
</author>
<author>
<name sortKey="Hirsch, Gb" uniqKey="Hirsch G">GB Hirsch</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Jones, Ap" uniqKey="Jones A">AP Jones</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Koopman, Js" uniqKey="Koopman J">JS Koopman</name>
</author>
<author>
<name sortKey="Jacquez, G" uniqKey="Jacquez G">G Jacquez</name>
</author>
<author>
<name sortKey="Chick, Se" uniqKey="Chick S">SE Chick</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Anderson, Rm" uniqKey="Anderson R">RM Anderson</name>
</author>
<author>
<name sortKey="May, Rm" uniqKey="May R">RM May</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Omony, J" uniqKey="Omony J">J Omony</name>
</author>
</analytic>
</biblStruct>
<biblStruct></biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Pitzer, Ve" uniqKey="Pitzer V">VE Pitzer</name>
</author>
<author>
<name sortKey="Leung, Gm" uniqKey="Leung G">GM Leung</name>
</author>
<author>
<name sortKey="Lipsitch, M" uniqKey="Lipsitch M">M Lipsitch</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Mcbryde, Es" uniqKey="Mcbryde E">ES McBryde</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Hirose, H" uniqKey="Hirose H">H Hirose</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Fine, Pe" uniqKey="Fine P">PE Fine</name>
</author>
<author>
<name sortKey="Clarkson, Ja" uniqKey="Clarkson J">JA Clarkson</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Anderson, Rm" uniqKey="Anderson R">RM Anderson</name>
</author>
<author>
<name sortKey="Grenfell, Bt" uniqKey="Grenfell B">BT Grenfell</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Anderson, Rm" uniqKey="Anderson R">RM Anderson</name>
</author>
<author>
<name sortKey="May, Rm" uniqKey="May R">RM May</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Edmunds, Wj" uniqKey="Edmunds W">WJ Edmunds</name>
</author>
<author>
<name sortKey="O Callaghan, Cj" uniqKey="O Callaghan C">CJ O'Callaghan</name>
</author>
<author>
<name sortKey="Nokes, Dj" uniqKey="Nokes D">DJ Nokes</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Mossong, J" uniqKey="Mossong J">J Mossong</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Wallinga, J" uniqKey="Wallinga J">J Wallinga</name>
</author>
<author>
<name sortKey="Teunis, P" uniqKey="Teunis P">P Teunis</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Royston, G" uniqKey="Royston G">G Royston</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Morilla, F" uniqKey="Morilla F">F Morilla</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Hirsch, G" uniqKey="Hirsch G">G Hirsch</name>
</author>
<author>
<name sortKey="Miller, S" uniqKey="Miller S">S Miller</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Luginbuhl, Wh" uniqKey="Luginbuhl W">WH Luginbuhl</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Roberts, C" uniqKey="Roberts C">C Roberts</name>
</author>
<author>
<name sortKey="Dangerfield, B" uniqKey="Dangerfield B">B Dangerfield</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Dangerfield, B" uniqKey="Dangerfield B">B Dangerfield</name>
</author>
<author>
<name sortKey="Fang, Y" uniqKey="Fang Y">Y Fang</name>
</author>
<author>
<name sortKey="Roberts, C" uniqKey="Roberts C">C Roberts</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Longini, Im" uniqKey="Longini I">IM Longini</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Halder, N" uniqKey="Halder N">N Halder</name>
</author>
<author>
<name sortKey="Kelso, Jk" uniqKey="Kelso J">JK Kelso</name>
</author>
<author>
<name sortKey="Milne, Gj" uniqKey="Milne G">GJ Milne</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Cauchemez, S" uniqKey="Cauchemez S">S Cauchemez</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Pitman, Rj" uniqKey="Pitman R">RJ Pitman</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Lipsitch, M" uniqKey="Lipsitch M">M Lipsitch</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Grassly, Nc" uniqKey="Grassly N">NC Grassly</name>
</author>
<author>
<name sortKey="Fraser, C" uniqKey="Fraser C">C Fraser</name>
</author>
</analytic>
</biblStruct>
<biblStruct>
<analytic>
<author>
<name sortKey="Hui, Ds" uniqKey="Hui D">DS Hui</name>
</author>
<author>
<name sortKey="Memish, Za" uniqKey="Memish Z">ZA Memish</name>
</author>
<author>
<name sortKey="Zumla, A" uniqKey="Zumla A">A Zumla</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<affiliations>
<list>
<country>
<li>Espagne</li>
</country>
</list>
<tree>
<country name="Espagne">
<noRegion>
<name sortKey="Alvarez, E" sort="Alvarez, E" uniqKey="Alvarez E" first="E." last="Álvarez">E. Álvarez</name>
</noRegion>
<name sortKey="Donado Campos, J" sort="Donado Campos, J" uniqKey="Donado Campos J" first="J." last="Donado-Campos">J. Donado-Campos</name>
<name sortKey="Morilla, F" sort="Morilla, F" uniqKey="Morilla F" first="F." last="Morilla">F. Morilla</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001274 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001274 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    SrasV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     PMC:7108648
   |texte=   New coronavirus outbreak. Lessons learned from the severe acute respiratory syndrome epidemic
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:25591619" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a SrasV1 

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 28 14:49:16 2020. Site generation: Sat Mar 27 22:06:49 2021